The exhaustive list of topics in Computational Biology using Python in which we provide Help with Homework Assignment and Help with Project is as follows:
- Phylogenetic Inference
- UPGMA
- Newick Notation
- Phylogenetic Trees
- Trees
- Data Structure
- Parsing Function
- Parsimony
- Sankoff Downpass Algorithm
- Fitch's Up Pass
- Greedy Algorithm for Trying Trees
- The Protein Design Problem.
- MM/PD
- Computational Methods vs. Exact Methods
- Reaction Rate and Reaction Propensity
- Achieving Faster Computation
- Biological Databases
- Rapid Database Search
- Regulatory Motif Discovery
- Probabilistic Motif Finding
- Sequence Alignment
- Markov Chains and Hidden Markov Models
- Gene Finding
- Genome Evolution and Phylogenetic Trees
- Genome Duplication
- Gene Expression Clustering
- Gene Network and Inference
- Scale-free Networks
- Comparative Genomics